Skip to content
Snippets Groups Projects
Commit 9b51cc56 authored by tcarver's avatar tcarver
Browse files

catch nullpointer

parent 6e6fcdc9
No related branches found
No related tags found
No related merge requests found
......@@ -388,17 +388,23 @@ public class ClusterLazyQualifierValue implements LazyQualifierValue
if(!subjectFeature.getCvTerm().getName().equals("gene") ||
!subjectFeature.getCvTerm().getName().equals("pseudogene"))
{
Feature parent = getParentFeature(subjectFeature);
if(parent.getCvTerm().getName().equals("gene") ||
parent.getCvTerm().getName().equals("pseudogene"))
geneName = parent.getUniqueName();
else if(parent != null)
Feature parent = getParentFeature(subjectFeature);
try
{
parent = getParentFeature(parent);
if(parent.getCvTerm().getName().equals("gene") ||
parent.getCvTerm().getName().equals("pseudogene"))
geneName = parent.getUniqueName();
else if(parent != null)
{
parent = getParentFeature(parent);
if(parent.getCvTerm().getName().equals("gene") ||
parent.getCvTerm().getName().equals("pseudogene"))
geneName = parent.getUniqueName();
}
}
catch(NullPointerException npe)
{
System.err.println(geneName+" parent not found");
}
}
return geneName;
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment